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Session 2

Section outline

  • Session 2

    -        Identification – species level

      • SILVA
      • EZ biocloud
      • ANI calculation


    -        Nomenclature

      • List of Prokaryotic Names with standing in Nomenclature (LPNS)

    -        Characterization – strain level

      • Antibiotic-resistance
      • Virulence genes
      • Carbohydrate active enzymes
      • CRISPR/phages
      • Reg precise (transcriptional regulators)
      • KEGG – Kyoto Encyclopedia of genes and genomes
      • https://microbe.directory/

    -        Phylogenetic analysis